Aliases : GRMZM2G085718
Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Encodes ABA Overly-Sensitive5 (ABO5), a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3. Involved in response to abscisic acid. ABA Overly-Sensitive 5 (ABO5)
Gene families : OG_01_0009007 (Gene family) Phylogenetic Tree(s): OG0009007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Zm00001d053561 | |
Cluster | HCCA cluster: Cluster_110 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G51965 | ABO5 | ABA Overly-Sensitive 5 | 0.04 | Gene family | |
LOC_Os02g13340 | Os02g0226900 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.05 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 184 | 213 |
IPR002885 | Pentatricopeptide_repeat | 357 | 382 |
IPR002885 | Pentatricopeptide_repeat | 392 | 421 |
IPR002885 | Pentatricopeptide_repeat | 217 | 261 |
IPR002885 | Pentatricopeptide_repeat | 493 | 540 |
IPR002885 | Pentatricopeptide_repeat | 563 | 606 |
IPR002885 | Pentatricopeptide_repeat | 287 | 333 |
IPR002885 | Pentatricopeptide_repeat | 454 | 487 |
No external refs found! |