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  5. Zm00001d053427

Zm00001d053427 (GRMZM2G004741)


Aliases : GRMZM2G004741

Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4 (GTE4)


Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d053427
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT5G46550 No alias DNA-binding bromodomain-containing protein 0.03 Gene family
Cpa|evm.model.tig00000632.12 No alias No description available 0.02 Gene family
GSVIVT01014233001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
GSVIVT01020670001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
LOC_Os02g15220 Os02g0250300 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
LOC_Os02g38980 Os02g0601800 35.2 not assigned.unknown Encodes NPX1 (Nuclear Protein... 0.02 Gene family
LOC_Os07g32420 Os07g0507700 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
MA_18020g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
MA_87057g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Solyc02g091660.3.1 Solyc02g091660.3 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Solyc07g062660.3.1 Solyc07g062660.3 27.3.52 RNA.regulation of transcription.Global... 0.04 Gene family
Solyc10g008070.3.1 Solyc10g008070.3 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Solyc12g014170.2.1 Solyc12g014170.2 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 325 407
IPR027353 NET_dom 491 552
No external refs found!