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  5. AMTR_s00105p00126340

AMTR_s00105p00126340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00105.61

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0008056 (SeedPlants) Phylogenetic Tree(s): OG_03_0008056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00105p00126340
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT3G47550 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 Archaeplastida
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Archaeplastida
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Zm00001e026209_P003 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Zm00001e028572_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e031477_P002 No alias RING-v-class E3 ligase 0.03 Archaeplastida
MA_10435273g0010 No alias RING-v-class E3 ligase 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022143 DUF3675 117 234
IPR011016 Znf_RING-CH 66 111
No external refs found!