Dcu_g40972


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g40972

Target Alias Description ECC score Gene Family Method Actions
Aev_g37757 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26165 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.06 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.03 OrthoFinder output from all 47 species
Ceric.34G070200.1 Ceric.34G070200 not classified & original description: pacid=50624170... 0.05 OrthoFinder output from all 47 species
Dcu_g17208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Msp_g19376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g20115 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28101 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g06277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16742 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g24804 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32044 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g41061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12706 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33764 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44848 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g53200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53557 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04368 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g21956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 621 643
IPR002885 Pentatricopeptide_repeat 319 340
IPR002885 Pentatricopeptide_repeat 520 542
IPR002885 Pentatricopeptide_repeat 650 679
IPR002885 Pentatricopeptide_repeat 217 240
IPR002885 Pentatricopeptide_repeat 420 445
IPR002885 Pentatricopeptide_repeat 448 474
IPR002885 Pentatricopeptide_repeat 823 848
IPR002885 Pentatricopeptide_repeat 748 794
IPR002885 Pentatricopeptide_repeat 243 284
IPR002885 Pentatricopeptide_repeat 546 592
IPR002885 Pentatricopeptide_repeat 348 391
IPR002885 Pentatricopeptide_repeat 144 190
IPR046848 E_motif 966 1028
IPR002885 Pentatricopeptide_repeat 873 932
No external refs found!