Dcu_g40955 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g40955
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g099166 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05074 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01606 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36004 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000662 No alias not classified & original description: CDS=1-2844 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g030992 No alias not classified & original description: CDS=1-2877 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043353 No alias not classified & original description: CDS=1-2244 0.07 OrthoFinder output from all 47 species
Azfi_s0094.g043395 No alias not classified & original description: CDS=1-2703 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.05 OrthoFinder output from all 47 species
Azfi_s0282.g063034 No alias not classified & original description: CDS=389-4795 0.03 OrthoFinder output from all 47 species
Azfi_s0743.g084788 No alias not classified & original description: CDS=1-1605 0.05 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07718 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29653 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29689 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G053100.1 Ceric.02G053100 not classified & original description: pacid=50584513... 0.04 OrthoFinder output from all 47 species
Ceric.02G109100.1 VAC1, ECB2,... not classified & original description: pacid=50584630... 0.04 OrthoFinder output from all 47 species
Ceric.19G049000.1 Ceric.19G049000 not classified & original description: pacid=50576332... 0.05 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.26G011100.1 Ceric.26G011100 not classified & original description: pacid=50599840... 0.04 OrthoFinder output from all 47 species
Ceric.35G058500.1 Ceric.35G058500 not classified & original description: pacid=50581681... 0.05 OrthoFinder output from all 47 species
Ceric.36G048700.1 Ceric.36G048700 not classified & original description: pacid=50569051... 0.04 OrthoFinder output from all 47 species
Dac_g05152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g06472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g08595 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08824 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08940 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16791 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g19158 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21328 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36052 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45849 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50121 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Len_g04365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g15926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39319 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03644 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g22640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 203 251
IPR002885 Pentatricopeptide_repeat 307 352
IPR002885 Pentatricopeptide_repeat 279 305
No external refs found!