Dcu_g40946


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g40946

Target Alias Description ECC score Gene Family Method Actions
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g36051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g23626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17318 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33635.t1 Aspi01Gene33635 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17429 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 233 255
IPR002885 Pentatricopeptide_repeat 261 291
IPR002885 Pentatricopeptide_repeat 132 153
IPR002885 Pentatricopeptide_repeat 29 51
IPR002885 Pentatricopeptide_repeat 55 101
IPR002885 Pentatricopeptide_repeat 156 204
No external refs found!