Dcu_g40902 (ATARFA1F, ARFA1F)

Aliases : ATARFA1F, ARFA1F

Description : not classified & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g40902

Target	Alias	Description	ECC score	Gene Family Method
AT1G70490	ARFA1D, ATARFA1D	Ras-related small GTP-binding family protein	0.05	OrthoFinder output from all 47 species
AT3G03120	ATARFB1C, ARFB1C	ADP-ribosylation factor B1C	0.02	OrthoFinder output from all 47 species
AT5G14670	ATARFA1B, ARFA1B	ADP-ribosylation factor A1B	0.04	OrthoFinder output from all 47 species
Adi_g009716	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g21909	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g11192	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g08438	ARFA1E, ATARFA1E	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38870	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g31560	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.09G076800.1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G015600.1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description:...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.129	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
Dac_g27561	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g07364	ARF1A1C	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26837	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013765001	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
GSVIVT01017654001	ATARFA1F, ARFA1F	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Gb_38391	ATARFA1F, ARFA1F	ARF-GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os01g16030.1	ATARFA1B,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os03g59740.1	ATARFA1B,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Len_g03591	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g05534	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g23069	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g31478	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Mp7g13050.1	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Nbi_g40990	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g43193	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020267	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: CDS=156-554	0.05	OrthoFinder output from all 47 species
Spa_g16801	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g29323	ATARFA1F, ARFA1F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g49716	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g49718	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e011790_P001	ATARFA1B,...	ARF-GTPase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	2	110

External Links

No external refs found!

Dcu_g40902 (ATARFA1F, ARFA1F)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation