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  5. Dcu_g39769

Dcu_g39769


Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39769

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251030 APUM2, PUM2,... Pumilio homolog 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00181800 PUM5, APUM5,... Pumilio homolog 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G20250 PUM5, APUM5 pumilio 5 0.03 OrthoFinder output from all 47 species
Adi_g067318 APUM4, PUM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16848 PUM1, APUM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g328250 No alias Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ehy_g25094 PUM1, APUM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024918001 PUM1, APUM1 Pumilio homolog 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g10215 APUM4, PUM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27289 PUM1, APUM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g123980.4.1 PUM5, APUM5,... Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g05236 PUM3, APUM3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027653_P001 PUM1, APUM1,... Pumilio homolog 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!