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  5. Dcu_g39518

Dcu_g39518


Description : not classified & original description: none


Gene families : OG0005649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39518
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT5G20140 No alias SOUL heme-binding family protein 0.09 OrthoFinder output from all 47 species
Adi_g022351 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27280.t1 Aspi01Gene27280 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0115.g046214 No alias not classified & original description: CDS=117-1316 0.04 OrthoFinder output from all 47 species
Cba_g18528 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.37G062400.1 Ceric.37G062400 not classified & original description: pacid=50616994... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.118 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.136 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g304400 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g11488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g21657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015471001 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.08 OrthoFinder output from all 47 species
Gb_04672 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os06g39690.1 LOC_Os06g39690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_85577g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp7g02650.1 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g09463 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016910 No alias transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Smo438881 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.08 OrthoFinder output from all 47 species
Solyc12g006805.1.1 Solyc12g006805 Heme-binding-like protein At3g10130, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 98 207
IPR006917 SOUL_haem-bd 251 415
No external refs found!