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  5. Dcu_g39397

Dcu_g39397 (LOB)


Aliases : LOB

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39397
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 LBD15, ASL11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AT2G23660 LBD10 LOB domain-containing protein 10 0.03 OrthoFinder output from all 47 species
AT3G13850 LBD22 LOB domain-containing protein 22 0.02 OrthoFinder output from all 47 species
GSVIVT01003546001 LBD10 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
LOC_Os10g07510.1 LBD18, LOC_Os10g07510 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Len_g20188 LBD12, ASL5, PCK1 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429262g0010 LBD25 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Tin_g12549 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 56 153
No external refs found!