Dcu_g38694


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38694

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00210350 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00031710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.03 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13562 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17237 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27705 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36933 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39266 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19042 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024817 No alias not classified & original description: CDS=20-3643 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045771 No alias not classified & original description: CDS=1-2433 0.02 OrthoFinder output from all 47 species
Azfi_s0144.g051584 No alias not classified & original description: CDS=1-1965 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054598 No alias not classified & original description: CDS=1-1869 0.02 OrthoFinder output from all 47 species
Azfi_s0216.g058493 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Azfi_s1707.g105997 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Cba_g02644 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16658 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G041400.1 Ceric.01G041400 not classified & original description: pacid=50592429... 0.05 OrthoFinder output from all 47 species
Ceric.01G084700.1 VAC1, ECB2,... not classified & original description: pacid=50592179... 0.04 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.03 OrthoFinder output from all 47 species
Ceric.09G092300.1 Ceric.09G092300 not classified & original description: pacid=50588334... 0.06 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.05 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.04 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.04 OrthoFinder output from all 47 species
Ceric.19G051600.1 EMB2261, Ceric.19G051600 not classified & original description: pacid=50576223... 0.04 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.03 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.03 OrthoFinder output from all 47 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g42743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05782 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07695 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08937 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26819 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50144 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003957001 No alias Pentatricopeptide repeat-containing protein At5g65570... 0.04 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.04 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
GSVIVT01036511001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Gb_36806 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
MA_10431227g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_123466g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_20622g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_9526611g0020 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g05393 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30840 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002988 No alias not classified & original description: CDS=1-2412 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009122 No alias not classified & original description: CDS=1-1917 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009148 No alias not classified & original description: CDS=1352-3946 0.03 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo47998 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.04 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.04 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.05 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.05 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 106
IPR002885 Pentatricopeptide_repeat 453 477
IPR002885 Pentatricopeptide_repeat 553 574
IPR002885 Pentatricopeptide_repeat 50 71
IPR002885 Pentatricopeptide_repeat 251 273
IPR046848 E_motif 595 655
IPR002885 Pentatricopeptide_repeat 478 526
IPR002885 Pentatricopeptide_repeat 377 424
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 175 222
No external refs found!