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  5. Dcu_g38581

Dcu_g38581


Description : associated component *(AFR) of histone deacetylase machineries & original description: none


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38581
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Adi_g002827 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Adi_g042772 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Adi_g077025 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Als_g09801 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Als_g13712 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Als_g21449 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aob_g03263 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aob_g17167 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11427.t1 Aspi01Gene11427 associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Azfi_s0305.g063893 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Cba_g50138 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ceric.07G066600.1 Ceric.07G066600 associated component *(AFR) of histone deacetylase... 0.08 OrthoFinder output from all 47 species
Ceric.18G085500.1 Ceric.18G085500 associated component *(AFR) of histone deacetylase... 0.07 OrthoFinder output from all 47 species
Ceric.28G016000.1 Ceric.28G016000 associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Ceric.29G039900.1 Ceric.29G039900 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ehy_g09035 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
LOC_Os04g08450.3 LOC_Os04g08450 associated component SAP30 of histone deacetylase machineries 0.11 OrthoFinder output from all 47 species
LOC_Os10g21460.1 LOC_Os10g21460 associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
Lfl_g18360 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Lfl_g23067 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Mp7g07500.1 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Ore_g01493 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ore_g05791 No alias associated component *(AFR) of histone deacetylase... 0.01 OrthoFinder output from all 47 species
Ore_g41852 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Pir_g00552 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Pir_g60562 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ppi_g30334 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007685 No alias associated component *(AFR) of histone deacetylase... 0.07 OrthoFinder output from all 47 species
Sam_g20047 No alias associated component *(AFR) of histone deacetylase... 0.06 OrthoFinder output from all 47 species
Sam_g30195 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Tin_g10450 No alias associated component *(AFR) of histone deacetylase... 0.06 OrthoFinder output from all 47 species
Zm00001e027006_P001 Zm00001e027006 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 226 278
No external refs found!