Dcu_g38097


Description : not classified & original description: none


Gene families : OG0005210 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005210_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38097

Target Alias Description ECC score Gene Family Method Actions
AT2G18900 No alias Transducin/WD40 repeat-like superfamily protein 0.06 OrthoFinder output from all 47 species
Azfi_s0026.g023316 No alias not classified & original description: CDS=130-2748 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.131 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g215350 No alias No description available 0.04 OrthoFinder output from all 47 species
Dde_g15566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030738001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os12g41620.1 LOC_Os12g41620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_40164g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g09630.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ppi_g12673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo166499 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g066410.4.1 Solyc07g066410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g05636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!