Dcu_g37300 (EIF4A-2)

Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A)) & original description: none

Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g37300

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022927	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.04	OrthoFinder output from all 47 species
Aop_g03155	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.03	OrthoFinder output from all 47 species
Ceric.14G044600.1	EIF4A-2, Ceric.14G044600	mRNA unwinding factor *(eIF4A)) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.21G079100.1	EIF4A-2, Ceric.21G079100	mRNA unwinding factor *(eIF4A)) & original description:...	0.03	OrthoFinder output from all 47 species
Cre03.g199647	EIF4A-III	RNA processing.RNA quality control Exon Junction complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01015173001	EIF4A-2	Protein biosynthesis.translation initiation.mRNA...	0.04	OrthoFinder output from all 47 species
Mp4g09540.1	EIF4A-III	helicase component eIF4A3 of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species
Pir_g14903	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.03	OrthoFinder output from all 47 species
Sam_g02045	No alias	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e016284_P001	EIF4A-III, Zm00001e016284	helicase component eIF4A3 of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	65	226
IPR001650	Helicase_C	266	374

External Links

No external refs found!