Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G16835 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Ala_g22784 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g75279 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g16628 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g35610.1 | LOC_Os04g35610 | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g30940.1 | LOC_Os06g30940 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g38951 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g16060 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g06373 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g06457 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g06929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g15182 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g17508 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0013.g005912 | No alias | not classified & original description: CDS=1-3210 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g12540 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g46652 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g50566 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g102690.4.1 | Solyc01g102690 | Pentatricopeptide repeat-containing protein At3g49710... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0008800 | beta-lactamase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009308 | amine metabolic process | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016812 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides | IEP | HCCA |
BP | GO:0016999 | antibiotic metabolic process | IEP | HCCA |
BP | GO:0017001 | antibiotic catabolic process | IEP | HCCA |
BP | GO:0030653 | beta-lactam antibiotic metabolic process | IEP | HCCA |
BP | GO:0030655 | beta-lactam antibiotic catabolic process | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0072338 | lactam metabolic process | IEP | HCCA |
BP | GO:0072340 | lactam catabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0120227 | acyl-CoA binding | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
MF | GO:1901567 | fatty acid derivative binding | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 251 | 297 |
IPR002885 | Pentatricopeptide_repeat | 149 | 196 |
IPR002885 | Pentatricopeptide_repeat | 452 | 500 |
IPR002885 | Pentatricopeptide_repeat | 553 | 601 |
IPR002885 | Pentatricopeptide_repeat | 351 | 399 |
IPR002885 | Pentatricopeptide_repeat | 326 | 349 |
IPR002885 | Pentatricopeptide_repeat | 124 | 148 |
No external refs found! |