Zm00001d052793 (GRMZM2G343828)


Aliases : GRMZM2G343828

Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Glycosyl hydrolase family protein


Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d052793
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT1G02640 ATBXL2, BXL2 beta-xylosidase 2 0.02 Gene family
GSVIVT01017658001 No alias 10.6.2 cell... 0.03 Gene family
GSVIVT01017659001 No alias 10.6.2 cell... 0.03 Gene family
GSVIVT01028104001 No alias 10.6.2 cell... 0.02 Gene family
GSVIVT01037844001 No alias 10.6.2 cell... 0.03 Gene family
LOC_Os01g19220 Os01g0296700 10.6.2 cell... 0.03 Gene family
LOC_Os02g51620 Os02g0752200 10.6.2 cell... 0.03 Gene family
LOC_Os04g54810 Os04g0640700 10.6.2 cell... 0.02 Gene family
MA_99945g0010 No alias 10.6.2 cell... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 136 388
IPR002772 Glyco_hydro_3_C 431 658
IPR026891 Fn3-like 726 793
No external refs found!