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  5. Dcu_g36291

Dcu_g36291


Description : scaffold protein *(KNL1) of kinetochore KNL1-Mis12-Ndc80 network & original description: none


Gene families : OG0008907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g36291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00171650 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G04235 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Ceric.09G042800.1 Ceric.09G042800 not classified & original description: pacid=50586606... 0.05 OrthoFinder output from all 47 species
GSVIVT01030128001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_06392 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_34187 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_34992 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_48262g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g10572 No alias scaffold protein *(KNL1) of kinetochore KNL1-Mis12-Ndc80... 0.04 OrthoFinder output from all 47 species
Solyc07g045170.3.1 Solyc07g045170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09448 No alias scaffold protein *(KNL1) of kinetochore KNL1-Mis12-Ndc80... 0.03 OrthoFinder output from all 47 species
Tin_g08297 No alias scaffold protein *(KNL1) of kinetochore KNL1-Mis12-Ndc80... 0.03 OrthoFinder output from all 47 species
Zm00001e037438_P001 Zm00001e037438 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!