Dcu_g36226


Description : E3 ubiquitin ligase *(AIRP1) & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g36226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00098310 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G17740 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G44370 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT2G44400 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
Aev_g18622 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13834 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G064000.1 Ceric.18G064000 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g01391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025366001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g41910.1 LOC_Os07g41910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g41920.1 LOC_Os07g41920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g42070.1 LOC_Os07g42070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g31980.1 LOC_Os09g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g00878 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_4432g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44989 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60934 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g073780.2.1 Solyc01g073780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073800.2.1 Solyc01g073800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073850.1.1 Solyc01g073850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g011260.2.1 Solyc09g011260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g011270.4.1 Solyc09g011270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 241 288
IPR004146 DC1 80 123
IPR004146 DC1 186 231
IPR004146 DC1 133 176
IPR001841 Znf_RING 367 409
No external refs found!