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  5. Dcu_g35897

Dcu_g35897


Description : not classified & original description: none


Gene families : OG0012426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35897
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Ala_g08068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G008600.1 Ceric.35G008600 not classified & original description: pacid=50581636... 0.05 OrthoFinder output from all 47 species
Ppi_g08277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 411 460
IPR046848 E_motif 731 792
IPR002885 Pentatricopeptide_repeat 688 713
IPR002885 Pentatricopeptide_repeat 286 308
IPR002885 Pentatricopeptide_repeat 185 211
IPR002885 Pentatricopeptide_repeat 314 344
IPR002885 Pentatricopeptide_repeat 651 678
IPR002885 Pentatricopeptide_repeat 588 609
IPR002885 Pentatricopeptide_repeat 213 243
IPR002885 Pentatricopeptide_repeat 616 646
IPR002885 Pentatricopeptide_repeat 114 140
IPR002885 Pentatricopeptide_repeat 512 559
No external refs found!