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  5. Dcu_g35384

Dcu_g35384 (VAP27, VAP27-1, (AT)VAP, VAP)


Aliases : VAP27, VAP27-1, (AT)VAP, VAP

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35384
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00209140 evm_27.TU.AmTr_v1... Vesicle-associated protein 2-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g085923 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Als_g05559 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Aob_g03941 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Cba_g05745 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01017816001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
LOC_Os04g45190.3 PVA12, LOC_Os04g45190 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46780.1 LOC_Os04g46780 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Lfl_g00566 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
MA_56506g0010 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.06 OrthoFinder output from all 47 species
Nbi_g06542 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
Ppi_g16185 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021931 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Sam_g07433 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Solyc01g090910.3.1 PVA12, Solyc01g090910 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Solyc08g007200.4.1 Solyc08g007200 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g007390.2.1 PVA12, Solyc08g007390 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e023141_P002 Zm00001e023141 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e023177_P005 Zm00001e023177 contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 46 145
No external refs found!