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  5. Dcu_g34188

Dcu_g34188


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g34188
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Ala_g21002 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Ceric.26G072500.1 Ceric.26G072500 not classified & original description: pacid=50600348... 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38813 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.04 OrthoFinder output from all 47 species
Msp_g42756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07995 No alias substrate adaptor of SCF E3 ubiquitin ligase *(PCH) &... 0.03 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015275 No alias not classified & original description: CDS=1-5475 0.02 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc01g095900.4.1 Solyc01g095900 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Solyc05g050630.4.1 Solyc05g050630 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016102_P002 Zm00001e016102 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Zm00001e033372_P001 Zm00001e033372 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 796 939
IPR028275 CLU_N 48 118
No external refs found!