1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_40040V3.1

Pp3c1_40040V3.1


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_40040V3.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G01305 No alias No description available 0.03 Archaeplastida
GSVIVT01009467001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Gb_06182 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.02 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
GSVIVT01009467001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.01 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.01 LandPlants
LOC_Os08g36740.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.01 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.01 LandPlants
MA_88831g0010 No alias transcription factor (bHLH) 0.05 LandPlants
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
Smo418491 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 LandPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!