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  5. Dcu_g33596

Dcu_g33596 (ATPIN1, PIN1)


Aliases : ATPIN1, PIN1

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g33596

Target Alias Description ECC score Gene Family Method Actions
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.05 OrthoFinder output from all 47 species
Ala_g26007 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31784 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058367 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03819 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08494 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008430001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Gb_29191 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os02g50960.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os05g50140.2 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Len_g04811 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19133 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
MA_61553g0020 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Ore_g05421 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07069 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25443 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29013 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02383 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26841 No alias auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Smo99301 ATPIN4, PIN4 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Solyc01g068410.4.1 PIN5, Solyc01g068410 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc05g008060.4.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Spa_g41431 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41931 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 691
No external refs found!