Pp3c1_38820V3.1


Description : phytochrome interacting factor 3


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_38820V3.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT1G02340 HFR1, FBI1, REP1, RSF1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.04 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.06 Archaeplastida
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
Gb_09709 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g56950.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
MA_10287127g0010 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
MA_167128g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_26114g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_488290g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp5g18910.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Smo39143 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AT1G02340 HFR1, FBI1, REP1, RSF1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT1G68240 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 LandPlants
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 LandPlants
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.04 LandPlants
Gb_09709 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.01 LandPlants
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
MA_10287127g0010 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 LandPlants
MA_167128g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_26114g0010 No alias transcription factor (bHLH) 0.02 LandPlants
MA_488290g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 LandPlants
Mp5g18910.1 No alias transcription factor (bHLH) 0.02 LandPlants
Smo39143 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!