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Aliases : CPSF30, ATCPSF30
Description : component *(CPSF30/Yth1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none
Gene families : OG0003202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003202_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g33224 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g28233 | CPSF30, ATCPSF30 | component *(CPSF30/Yth1) of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014277 | CPSF30, ATCPSF30 | component *(CPSF30/Yth1) of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26119 | CPSF30, ATCPSF30 | component *(CPSF30/Yth1) of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Mp6g15200.1 | CPSF30, ATCPSF30 | component CPSF30/Yth1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g42075 | CPSF30, ATCPSF30 | component *(CPSF30/Yth1) of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g021760.3.1 | CPSF30,... | component CPSF30/Yth1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g070240.3.1 | CPSF30,... | component CPSF30/Yth1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007275 | YTH_domain | 311 | 445 |
| No external refs found! |