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  5. Zm00001d052314

Zm00001d052314 (GRMZM2G111818)


Aliases : GRMZM2G111818

Description : 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. ubiquitin-activating enzyme 1 (UBA1)


Gene families : OG_01_0001442 (Gene family) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d052314
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT2G30110 UBA1, MOS5, ATUBA1 ubiquitin-activating enzyme 1 0.04 Gene family
Cpa|evm.model.tig00000057.43 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.01 Gene family
Cre09.g386400 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family
GSVIVT01024680001 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.04 Gene family
LOC_Os03g18380 Os03g0294900 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family
Smo179776 PACid_15412414 No description available 0.03 Gene family
Solyc06g007320.3.1 Solyc06g007320.3 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family
Solyc09g018450.3.1 Solyc09g018450.3 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018965 Ub-activating_enz_E1_C 988 1077
IPR000594 ThiF_NAD_FAD-bd 111 456
IPR000594 ThiF_NAD_FAD-bd 477 977
IPR019572 UBA_E1_Cys 664 917
IPR032418 E1_FCCH 254 324
IPR032420 E1_4HB 326 395
No external refs found!