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  5. Dcu_g32525

Dcu_g32525


Description : component *(UBN) of HIRA chaperone complex & original description: none


Gene families : OG0002157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g32525

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00245850 evm_27.TU.AmTr_v1... Ubinuclein-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G77310 No alias BEST Arabidopsis thaliana protein match is:... 0.02 OrthoFinder output from all 47 species
Aob_g03526 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008808001 No alias Ubinuclein-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_13832 No alias Ubinuclein-1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66050.1 LOC_Os01g66050 Ubinuclein-1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g23230 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
MA_103731g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp2g14320.1 No alias Ubinuclein-1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Sam_g27050 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
Smo440877 No alias Ubinuclein-2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc11g005130.2.1 Solyc11g005130 Ubinuclein-1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e019054_P001 Zm00001e019054 Ubinuclein-1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR014840 HRD 132 172
No external refs found!