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  5. Aev_g27762

Aev_g27762 (PETB)


Aliases : PETB

Description : apocytochrome b component *(PetB) of cytochrome b6/f complex & original description: none


Gene families : OG0001563 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g27762
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
ATCG00720 PETB photosynthetic electron transfer B 0.08 OrthoFinder output from all 39 species
Adi_g108137 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.01 OrthoFinder output from all 39 species
Ala_g16991 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.01 OrthoFinder output from all 39 species
Als_g16096 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.06 OrthoFinder output from all 39 species
Aob_g31343 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.11 OrthoFinder output from all 39 species
Aop_g39087 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.03 OrthoFinder output from all 39 species
Azfi_s0264.g060907 No alias not classified & original description: CDS=1-306 0.03 OrthoFinder output from all 39 species
Cba_g32063 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.07 OrthoFinder output from all 39 species
Ceric.05G041700.1 PETB, Ceric.05G041700 not classified & original description: pacid=50577646... 0.07 OrthoFinder output from all 39 species
Ceric.05G044900.1 PETB, Ceric.05G044900 not classified & original description: pacid=50577209... 0.04 OrthoFinder output from all 39 species
Ceric.05G046100.1 PETB, Ceric.05G046100 not classified & original description: pacid=50579165... 0.01 OrthoFinder output from all 39 species
Ceric.05G051500.1 PETB, Ceric.05G051500 not classified & original description: pacid=50578079... 0.05 OrthoFinder output from all 39 species
Ceric.1Z019500.1 PETB, Ceric.1Z019500 apocytochrome b component *(PetB) of cytochrome b6/f... 0.03 OrthoFinder output from all 39 species
Ceric.1Z020900.1 PETB, Ceric.1Z020900 not classified & original description: pacid=50586386... 0.03 OrthoFinder output from all 39 species
Ceric.1Z163200.1 PETB, Ceric.1Z163200 not classified & original description: pacid=50596955... 0.12 OrthoFinder output from all 39 species
Ceric.29G003600.1 Ceric.29G003600 not classified & original description: pacid=50625327... 0.04 OrthoFinder output from all 39 species
Ceric.29G003700.1 PETB, Ceric.29G003700 not classified & original description: pacid=50624590... 0.05 OrthoFinder output from all 39 species
Ceric.36G044700.1 PETB, Ceric.36G044700 not classified & original description: pacid=50568540... 0.05 OrthoFinder output from all 39 species
Ceric.38G008400.1 PETB, Ceric.38G008400 not classified & original description: pacid=50579337... 0.07 OrthoFinder output from all 39 species
Dcu_g12401 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.03 OrthoFinder output from all 39 species
Ehy_g08993 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.01 OrthoFinder output from all 39 species
Gb_17283 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.13 OrthoFinder output from all 39 species
Gb_36746 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.09 OrthoFinder output from all 39 species
LOC_Os01g57942.1 PETB, LOC_Os01g57942 apocytochrome b component PetB of cytochrome b6/f complex 0.08 OrthoFinder output from all 39 species
LOC_Os04g16846.1 PETB, LOC_Os04g16846 apocytochrome b component PetB of cytochrome b6/f complex 0.08 OrthoFinder output from all 39 species
LOC_Os10g21324.1 PETB, LOC_Os10g21324 apocytochrome b component PetB of cytochrome b6/f complex 0.08 OrthoFinder output from all 39 species
Lfl_g01322 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.15 OrthoFinder output from all 39 species
Mp1g00740.1 PETB Cytochrome b6 OS=Marchantia polymorpha... 0.07 OrthoFinder output from all 39 species
Msp_g43879 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.01 OrthoFinder output from all 39 species
Nbi_g15023 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.02 OrthoFinder output from all 39 species
Ore_g00397 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.13 OrthoFinder output from all 39 species
Pir_g60096 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.08 OrthoFinder output from all 39 species
Pp3c21_5650V3.1 PETB, Pp3c21_5650 photosynthetic electron transfer B 0.04 OrthoFinder output from all 39 species
Ppi_g00989 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.1 OrthoFinder output from all 39 species
Sam_g02910 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.05 OrthoFinder output from all 39 species
Solyc00g500027.1.1 Solyc00g500027 no hits & (original description: none) 0.07 OrthoFinder output from all 39 species
Solyc00g500073.1.1 PETB, Solyc00g500073 Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.07 OrthoFinder output from all 39 species
Spa_g04295 No alias apocytochrome b component *(PetB) of cytochrome b6/f... 0.08 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 20 208
No external refs found!