Zm00001d051591 (GRMZM2G342515)


Aliases : GRMZM2G342515

Description : 28.1.3.2.1 DNA.synthesis/chromatin structure.histone.core.H2A HTB4


Gene families : OG_01_0000162 (Gene family) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d051591
Cluster HCCA cluster: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 HTB1 Histone superfamily protein 0.07 Gene family
AT2G37470 No alias Histone superfamily protein 0.09 Gene family
AT3G45980 HTB9, H2B Histone superfamily protein 0.06 Gene family
AT3G46030 HTB11 Histone superfamily protein 0.07 Gene family
AT5G22880 HTB2, H2B histone B2 0.07 Gene family
AT5G59910 HTB4 Histone superfamily protein 0.07 Gene family
GSVIVT01016164001 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.07 Gene family
GSVIVT01025021001 No alias No description available 0.05 Gene family
GSVIVT01025025001 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.06 Gene family
LOC_Os01g05610 Os01g0149400 No description available 0.03 Gene family
LOC_Os01g05630 Os01g0149600 No description available 0.03 Gene family
LOC_Os01g05900 Os01g0152300 No description available 0.07 Gene family
LOC_Os01g06010 Os01g0153300 28.1.3.2.2 DNA.synthesis/chromatin... 0.03 Gene family
LOC_Os05g49860 Os05g0574300 28.1.3.2.2 DNA.synthesis/chromatin... 0.07 Gene family
LOC_Os08g38300 Os08g0490900 No description available 0.08 Gene family
MA_10428006g0010 No alias No description available 0.03 Gene family
MA_10434433g0010 No alias No description available 0.03 Gene family
MA_10435143g0010 No alias No description available 0.06 Gene family
MA_10435143g0020 No alias No description available 0.06 Gene family
MA_10436516g0010 No alias No description available 0.06 Gene family
MA_13454g0010 No alias No description available 0.03 Gene family
MA_38565g0010 No alias No description available 0.03 Gene family
MA_6078786g0010 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.04 Gene family
MA_77198g0010 No alias No description available 0.07 Gene family
MA_9293473g0010 No alias No description available 0.04 Gene family
Smo182308 PACid_15418220 No description available 0.03 Gene family
Solyc02g038690.1.1 Solyc02g038690.1 No description available 0.12 Gene family
Solyc03g071620.1.1 Solyc03g071620.1 28.1.3.2.2 DNA.synthesis/chromatin... 0.12 Gene family
Solyc05g055440.1.1 Solyc05g055440.1 No description available 0.09 Gene family
Solyc06g074780.2.1 Solyc06g074780.2 28.1.3.2.2 DNA.synthesis/chromatin... 0.11 Gene family
Solyc06g075800.1.1 Solyc06g075800.1 No description available 0.12 Gene family
Solyc11g066430.1.1 Solyc11g066430.1 No description available 0.11 Gene family
Solyc12g013510.1.1 Solyc12g013510.1 No description available 0.07 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 5 130
No external refs found!