Zm00001d051577 (GRMZM2G589696)


Aliases : GRMZM2G589696

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles. HIGH CAMBIAL ACTIVITY2 (HCA2)


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d051577

Target Alias Description ECC score Gene Family Method Actions
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.04 Gene family
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
LOC_Os03g42200 Os03g0619001,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os03g55610 Os03g0764900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os08g38220 Os08g0490100 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os12g39990 Os12g0590700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
MA_16692g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
MA_459791g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_56828g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_7537g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc01g096120.3.1 Solyc01g096120.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g077960.2.1 Solyc02g077960.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc02g078620.1.1 Solyc02g078620.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc06g071480.3.1 Solyc06g071480.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc06g075370.3.1 Solyc06g075370.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
Zm00001d001824 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d032578 GRMZM2G456452 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 64 120
No external refs found!