Zm00001d051576 (GRMZM2G110483)


Aliases : GRMZM2G110483

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d051576
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Gene family
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Gene family
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
GSVIVT01007645001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01010654001 No alias No description available 0.04 Gene family
GSVIVT01015325001 No alias No description available 0.05 Gene family
GSVIVT01017763001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01021023001 No alias No description available 0.05 Gene family
GSVIVT01028022001 No alias No description available 0.03 Gene family
GSVIVT01028819001 No alias No description available 0.03 Gene family
GSVIVT01029382001 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.04 Gene family
GSVIVT01032394001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01035920001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os01g51810 Os01g0715900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os01g60250 Os01g0818200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os01g74600 Os01g0977400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os03g08680 Os03g0185200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.03 Gene family
LOC_Os06g02200 Os06g0112000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os11g01836 Os11g0109600 No description available 0.03 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.05 Gene family
MA_10429540g0020 No alias No description available 0.03 Gene family
MA_105629g0010 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
MA_107356g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_11454g0010 No alias No description available 0.03 Gene family
MA_116829g0010 No alias No description available 0.03 Gene family
MA_121267g0010 No alias No description available 0.03 Gene family
MA_122899g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_140591g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_16226g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_177435g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_193080g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_20599g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_20899g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_210823g0010 No alias No description available 0.03 Gene family
MA_211508g0010 No alias No description available 0.04 Gene family
MA_252238g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_2991g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_30949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_3317g0020 No alias No description available 0.04 Gene family
MA_34492g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_3449g0010 No alias No description available 0.04 Gene family
MA_36643g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_36655g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_445076g0010 No alias No description available 0.06 Gene family
MA_483636g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_56322g0010 No alias No description available 0.05 Gene family
MA_59148g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_61422g0020 No alias No description available 0.04 Gene family
MA_7691g0010 No alias No description available 0.02 Gene family
MA_8210920g0010 No alias No description available 0.03 Gene family
MA_83898g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_86739g0010 No alias No description available 0.03 Gene family
MA_90090g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_9258g0010 No alias No description available 0.03 Gene family
MA_96662g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_97789g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.04 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.08 Gene family
Solyc01g081290.3.1 Solyc01g081290.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g091610.1.1 Solyc01g091610.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc02g011680.3.1 Solyc02g011680.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc02g076700.1.1 Solyc02g076700.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc02g079380.2.1 Solyc02g079380.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc02g088650.1.1 Solyc02g088650.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc02g093380.1.1 Solyc02g093380.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc02g094480.3.1 Solyc02g094480.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc03g007840.1.1 Solyc03g007840.1 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
Solyc03g082830.2.1 Solyc03g082830.2 No description available 0.02 Gene family
Solyc03g093630.2.1 Solyc03g093630.2 No description available 0.06 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.07 Gene family
Solyc03g116843.1.1 Solyc03g116843.1 No description available 0.06 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc05g023900.1.1 Solyc05g023900.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc06g066080.1.1 Solyc06g066080.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.07 Gene family
Solyc07g053520.2.1 Solyc07g053520.2 No description available 0.06 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc08g078570.2.1 Solyc08g078570.2 No description available 0.08 Gene family
Solyc09g007040.1.1 Solyc09g007040.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc09g009950.3.1 Solyc09g009950.3 No description available 0.03 Gene family
Solyc09g059580.2.1 Solyc09g059580.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.1 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.03 Gene family
Solyc11g007230.1.1 Solyc11g007230.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc11g008970.1.1 Solyc11g008970.1 No description available 0.1 Gene family
Solyc11g067210.1.1 Solyc11g067210.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d028388 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.04 Gene family
Zm00001d028587 GRMZM5G836424 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d043068 GRMZM2G399433 No description available 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 911 930
IPR002885 Pentatricopeptide_repeat 1012 1035
IPR002885 Pentatricopeptide_repeat 637 656
IPR002885 Pentatricopeptide_repeat 809 835
IPR002885 Pentatricopeptide_repeat 734 781
IPR002885 Pentatricopeptide_repeat 935 983
No external refs found!