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Description : component *(RPP1) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000349_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g26924 | |
| Cluster | HCCA: Cluster_378 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00113490 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00810 | No alias | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09775 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22529 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000668 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g54064 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11087 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g51469 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g38623 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19763 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019679001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g02340.1 | LOC_Os08g02340 | component RPP1 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g32507 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| MA_90134g0010 | No alias | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g38999 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Nbi_g31058 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g33224 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_36220V3.1 | Pp3c1_36220 | 60S acidic ribosomal protein family | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c20_2800V3.1 | Pp3c20_2800 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c23_18100V3.1 | Pp3c23_18100 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_22380V3.1 | Pp3c8_22380 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07968 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03056 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g05395 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g20755 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Sam_g26274 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g31849 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g32024 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g006160.3.1 | Solyc01g006160 | component RPP1 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g104370.4.1 | Solyc01g104370 | component RPP1 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029197_P001 | Zm00001e029197 | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0008199 | ferric iron binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |