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  5. Dcu_g26820

Dcu_g26820


Description : regulatory protein *(SHOU4) involved in cellulose synthase trafficking & original description: none


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g26820

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00249170 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.03 OrthoFinder output from all 47 species
Adi_g014773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03201 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aspi01Gene19318.t1 Aspi01Gene19318 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008401 No alias not classified & original description: CDS=558-1895 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037099 No alias not classified & original description: CDS=1146-2774 0.03 OrthoFinder output from all 47 species
Cba_g02031 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Cba_g05847 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Cba_g05871 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ceric.18G001900.1 Ceric.18G001900 regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Dac_g03755 No alias regulatory protein *(SHOU4) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Dcu_g14768 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dde_g02263 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
GSVIVT01016057001 No alias Uncharacterized membrane protein At1g16860... 0.03 OrthoFinder output from all 47 species
Len_g10965 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Msp_g13201 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ppi_g01208 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007411 No alias not classified & original description: CDS=1388-3022 0.03 OrthoFinder output from all 47 species
Sam_g11303 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sam_g16842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sam_g26311 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Smo438884 No alias Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Solyc04g014680.4.1 Solyc04g014680 Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Solyc12g017450.2.1 Solyc12g017450 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Tin_g25164 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e022289_P002 Zm00001e022289 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Zm00001e040067_P002 Zm00001e040067 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!