Dcu_g26743


Description : component *(MED19) of head module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g26743
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00223290 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT2G41080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g19233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26323 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54936 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g33537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g24173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35171 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g59978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g66997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G047700.1 Ceric.02G047700 not classified & original description: pacid=50586056... 0.06 OrthoFinder output from all 47 species
Ceric.20G006900.1 Ceric.20G006900 not classified & original description: pacid=50565918... 0.05 OrthoFinder output from all 47 species
Ceric.23G082400.1 CRR22, Ceric.23G082400 not classified & original description: pacid=50611294... 0.05 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.05 OrthoFinder output from all 47 species
Ceric.36G059800.1 Ceric.36G059800 not classified & original description: pacid=50568853... 0.04 OrthoFinder output from all 47 species
Dac_g09645 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g06775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_05488 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_15639 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_32439 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_38249 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04400.1 LOC_Os08g04400 Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.06 OrthoFinder output from all 47 species
Len_g33406 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g49921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Ppi_g06944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62885 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo82024 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Spa_g06005 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 177 223
IPR002885 Pentatricopeptide_repeat 75 121
IPR002885 Pentatricopeptide_repeat 151 174
IPR002885 Pentatricopeptide_repeat 49 71
No external refs found!