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  5. Dcu_g26231

Dcu_g26231


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g26231
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.03 OrthoFinder output from all 47 species
Cba_g04710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13422 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16950 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21216 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g08660.1 LOC_Os06g08660 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Lfl_g04980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07314 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g15926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16554 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g07560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Tin_g06592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 253 300
IPR002885 Pentatricopeptide_repeat 155 203
IPR002885 Pentatricopeptide_repeat 557 603
IPR002885 Pentatricopeptide_repeat 354 403
IPR002885 Pentatricopeptide_repeat 456 502
IPR002885 Pentatricopeptide_repeat 632 657
IPR002885 Pentatricopeptide_repeat 762 789
IPR002885 Pentatricopeptide_repeat 531 554
IPR002885 Pentatricopeptide_repeat 834 857
IPR002885 Pentatricopeptide_repeat 733 758
IPR002885 Pentatricopeptide_repeat 660 689
No external refs found!