Zm00001d051465 (GRMZM2G003514)


Aliases : GRMZM2G003514

Description : 27.3.24 RNA.regulation of transcription.MADS box transcription factor family sequence suggests this encodes a MADS-box transcription factor AGAMOUS-like 6 (AGL6)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d051465
Cluster HCCA cluster: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.04 Gene family
GSVIVT01010521001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
GSVIVT01027577001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01033253001 No alias No description available 0.01 Gene family
GSVIVT01035477001 No alias 33.99 development.unspecified Encodes a member of the... 0.03 Gene family
LOC_Os02g45770 Os02g0682200 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
LOC_Os04g49150 Os04g0580700 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os05g11380 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os05g11414 Os05g0203800 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os07g01820 Os07g0108900 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os08g41950 Os08g0531700 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os09g02780 Os09g0116000 No description available 0.02 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.01 Gene family
MA_6042439g0010 No alias No description available 0.02 Gene family
Smo121275 PACid_15416177 No description available 0.02 Gene family
Solyc01g093960.3.1 Solyc01g093960.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc01g106730.2.1 Solyc01g106730.2 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc02g089210.3.1 Solyc02g089210.3 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Solyc02g091550.2.1 Solyc02g091550.2 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
Solyc10g017630.2.1 Solyc10g017630.2 No description available 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 86 171
IPR002100 TF_MADSbox 10 57
No external refs found!