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  5. Dcu_g24136

Dcu_g24136


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g24136

Target Alias Description ECC score Gene Family Method Actions
AT3G02340 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G061800.1 Ceric.02G061800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Lfl_g18639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_126084g0010 RHC2A E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
Nbi_g02310 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g16022 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g20514 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g52386 No alias E3 ubiquitin ligase *(SNIPER) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020256 No alias not classified & original description: CDS=1-1698 0.01 OrthoFinder output from all 47 species
Sam_g05898 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g09427 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Solyc02g088030.1.1 Solyc02g088030 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e012628_P001 Zm00001e012628 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 323 365
IPR039525 RNF126-like_zinc-ribbon 105 135
No external refs found!