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  5. Dcu_g24041

Dcu_g24041


Description : E3 ubiquitin ligase *(RGLG) & original description: none


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g24041
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT5G14420 RGLG2 RING domain ligase2 0.03 OrthoFinder output from all 47 species
AT5G63970 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.03 OrthoFinder output from all 47 species
Als_g18014 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002586001 RGLG2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Lfl_g23658 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30852 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06816 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06814 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08521 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52372 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g093520.3.1 RGLG2, Solyc02g093520 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Spa_g55605 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01763 RGLG2 E3 ubiquiTin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR010734 Copine_C 53 264
No external refs found!