Zm00001d051161 (GRMZM2G160541)


Aliases : GRMZM2G160541

Description : 16.2.1.1 secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).


Gene families : OG_01_0000256 (Gene family) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d051161
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006148001 No alias No description available 0.02 Gene family
GSVIVT01015124001 No alias No description available 0.02 Gene family
GSVIVT01025703001 No alias No description available 0.06 Gene family
LOC_Os02g41670 Os02g0626600 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
LOC_Os05g35290 Os05g0427400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Solyc03g036470.2.1 Solyc03g036470.2 No description available 0.02 Gene family
Solyc03g036473.1.1 Solyc03g036473.1 No description available 0.02 Gene family
Solyc03g042560.2.1 Solyc03g042560.2 No description available 0.02 Gene family
Solyc10g086180.2.1 Solyc10g086180.2 No description available 0.01 Gene family
Zm00001d033286 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 1 377
No external refs found!