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  5. Dcu_g23552

Dcu_g23552 (ETR, ETR1, EIN1, AtETR1)


Aliases : ETR, ETR1, EIN1, AtETR1

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0000619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g23552

Target Alias Description ECC score Gene Family Method Actions
Adi_g089263 ETR, ETR1, EIN1, AtETR1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.26 ETR, ETR1, EIN1, AtETR1 Ethylene receptor 1 OS=Pelargonium hortorum 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020616.22 HK3, AHK3 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
Gb_36440 ETR, ETR1, EIN1, AtETR1 ETR/ERS-type ethylene receptor protein 0.03 OrthoFinder output from all 47 species
Mp1g19450.1 ETR, ETR1, EIN1, AtETR1 ETR/ERS-type ethylene receptor protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 344 408
IPR003594 HATPase_C 455 586
IPR003018 GAF 158 307
IPR001789 Sig_transdc_resp-reg_receiver 615 729
No external refs found!