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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00244370 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g05340... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00122p00115170 | CRR21 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017307 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17771 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g18491 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19033 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19058 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26475 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g31748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g32003 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g33107 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g62404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03740 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16810 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g32922 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029919 | No alias | not classified & original description: CDS=1-2448 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g07175 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75350 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G085300.1 | Ceric.11G085300 | not classified & original description: pacid=50596385... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G074100.1 | Ceric.14G074100 | not classified & original description: pacid=50633188... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z079200.1 | CRR22, Ceric.1Z079200 | not classified & original description: pacid=50582193... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G011600.1 | Ceric.25G011600 | not classified & original description: pacid=50594012... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G036300.1 | Ceric.25G036300 | not classified & original description: pacid=50594016... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.27G011400.1 | Ceric.27G011400 | not classified & original description: pacid=50605728... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G070800.1 | Ceric.29G070800 | not classified & original description: pacid=50625555... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.30G012500.1 | Ceric.30G012500 | not classified & original description: pacid=50608997... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g27755 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g38493 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g31630 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15735 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16096 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16409 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26395 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28915 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g35725 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g36038 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g44017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46821 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000719001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011333001 | SLO1 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012461001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033735001 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g49830.1 | LOC_Os02g49830 | Pentatricopeptide repeat-containing protein At3g22690... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g51350.1 | LOC_Os04g51350 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g17530.2 | LOC_Os11g17530 | Pentatricopeptide repeat-containing protein At2g37320... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03880 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19014 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44793 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g36058 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| MA_82569g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g28092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41097 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g11470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20419 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27636 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27843 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g29548 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10372 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02840 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g12561 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60920 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15475 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g06887 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g06986 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004479 | No alias | not classified & original description: CDS=197-3106 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0215.g026034 | OTP84 | not classified & original description: CDS=2081-4369 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0252.g026781 | No alias | not classified & original description: CDS=1-2700 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0260.g026882 | No alias | not classified & original description: CDS=1-687 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14924 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16013 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17157 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g29223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30280 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37186 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38908 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39339 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g065250.1.1 | EMB2744, Solyc11g065250 | Pentatricopeptide repeat-containing protein At5g39680... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g27883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g44822 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g11538 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20109 | OTP84 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026664_P002 | Zm00001e026664 | RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 640 | 664 |
| IPR002885 | Pentatricopeptide_repeat | 366 | 396 |
| IPR002885 | Pentatricopeptide_repeat | 338 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 162 | 209 |
| IPR002885 | Pentatricopeptide_repeat | 262 | 309 |
| IPR002885 | Pentatricopeptide_repeat | 566 | 613 |
| IPR002885 | Pentatricopeptide_repeat | 464 | 511 |
| No external refs found! |