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  5. Dcu_g23448

Dcu_g23448 (GCP1)


Aliases : GCP1

Description : mitochondrial tRNA threonylcarbamoyl transferase & original description: none


Gene families : OG0004465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004465_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g23448

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00021300 GCP1,... RNA processing.RNA modification.tRNA... 0.02 OrthoFinder output from all 47 species
Adi_g106937 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.05 OrthoFinder output from all 47 species
Aop_g38836 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene46287.t1 GCP1, Aspi01Gene46287 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044750 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29990.1 GCP1, LOC_Os12g29990 mitochondrial tRNA threonylcarbamoyl transferase 0.04 OrthoFinder output from all 47 species
Len_g20277 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.05 OrthoFinder output from all 47 species
Ore_g18500 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.04 OrthoFinder output from all 47 species
Smo120984 GCP1 RNA processing.RNA modification.tRNA... 0.02 OrthoFinder output from all 47 species
Spa_g16171 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.05 OrthoFinder output from all 47 species
Zm00001e017458_P002 GCP1, Zm00001e017458 mitochondrial tRNA threonylcarbamoyl transferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000905 Gcp-like_dom 130 434
No external refs found!