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  5. Dcu_g22621

Dcu_g22621


Description : not classified & original description: none


Gene families : OG0004324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g22621

Target Alias Description ECC score Gene Family Method Actions
AT3G43590 No alias zinc knuckle (CCHC-type) family protein 0.02 OrthoFinder output from all 47 species
Ala_g07275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G021500.1 Ceric.10G021500 not classified & original description: pacid=50612055... 0.04 OrthoFinder output from all 47 species
Cre01.g013800 No alias No description available 0.02 OrthoFinder output from all 47 species
Sam_g09786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 328 344
IPR001878 Znf_CCHC 176 193
IPR001878 Znf_CCHC 217 233
No external refs found!