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  5. Dcu_g22383

Dcu_g22383


Description : histone H3 methylation reader (PWO) of PRC2 histone methylation complex & original description: none


Gene families : OG0002361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002361_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g22383
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT3G03140 No alias Tudor/PWWP/MBT superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G21295 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g10024 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Aob_g06752 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Aop_g02608 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Aop_g11285 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Ceric.02G093600.1 Ceric.02G093600 histone H3 methylation reader (PWO) of PRC2 histone... 0.07 OrthoFinder output from all 47 species
Ceric.06G066400.1 Ceric.06G066400 histone H3 methylation reader (PWO) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
GSVIVT01016893001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
GSVIVT01016894001 No alias Uncharacterized protein At1g51745 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01024445001 No alias Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
Len_g22550 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.04 OrthoFinder output from all 47 species
Lfl_g02427 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Pir_g01062 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Pir_g49621 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Ppi_g01387 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Ppi_g12655 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Sam_g10571 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Sam_g16154 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Solyc03g121320.3.1 Solyc03g121320 histone H3 methylation reader (PWO) 0.04 OrthoFinder output from all 47 species
Zm00001e023309_P002 Zm00001e023309 histone H3 methylation reader (PWO) 0.02 OrthoFinder output from all 47 species
Zm00001e026683_P002 Zm00001e026683 histone H3 methylation reader (PWO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 16 91
No external refs found!