Zm00001d050840 (GRMZM2G041344)


Aliases : GRMZM2G041344

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d050840
Cluster HCCA cluster: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G72200 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G18670 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42350 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G44578 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Gene family
AT3G60966 No alias RING/U-box superfamily protein 0.04 Gene family
AT4G35480 RHA3B RING-H2 finger A3B 0.02 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01000015001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01005189001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01018343001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01037142001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.04 Gene family
LOC_Os02g35329 Os02g0559800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os02g35440 Os02g0561900 No description available 0.04 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os02g46340 Os02g0688800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g44642 No alias No description available 0.03 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os05g11860 No alias No description available 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.02 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.02 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os11g47690 Os11g0703200 No description available 0.03 Gene family
MA_181142g0010 No alias No description available 0.02 Gene family
MA_227897g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_552961g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_78643g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo39820 PACid_15420975 No description available 0.02 Gene family
Smo59303 PACid_15409233 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc11g005290.2.1 Solyc11g005290.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016139 GRMZM2G098925 No description available 0.04 Gene family
Zm00001d025837 GRMZM2G016487 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d027983 GRMZM2G148706 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.02 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d046147 No alias No description available 0.02 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.02 Gene family
Zm00001d050514 GRMZM2G068239 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 142 185
No external refs found!