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  5. Dcu_g21489

Dcu_g21489


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g21489

Target Alias Description ECC score Gene Family Method Actions
AT1G50140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G19740 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g023416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g27974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20700 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g33985 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g59488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14828 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g30592 No alias EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Aop_g20550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38622.t1 Aspi01Gene38622 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38637.t1 Aspi01Gene38637 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42682.t1 Aspi01Gene42682 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene45543.t1 Aspi01Gene45543 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0805.g087571 No alias not classified & original description: CDS=256-3405 0.03 OrthoFinder output from all 47 species
Cba_g05976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G079000.1 Ceric.02G079000 not classified & original description: pacid=50585939... 0.09 OrthoFinder output from all 47 species
Ceric.14G049600.1 Ceric.14G049600 not classified & original description: pacid=50633231... 0.06 OrthoFinder output from all 47 species
Ceric.19G001800.1 Ceric.19G001800 not classified & original description: pacid=50575443... 0.04 OrthoFinder output from all 47 species
Ceric.1Z097100.1 Ceric.1Z097100 not classified & original description: pacid=50640984... 0.06 OrthoFinder output from all 47 species
Ceric.21G078500.1 Ceric.21G078500 not classified & original description: pacid=50604341... 0.09 OrthoFinder output from all 47 species
Dac_g01786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012038001 No alias ATPase family AAA domain-containing protein FIGL1... 0.04 OrthoFinder output from all 47 species
GSVIVT01027983001 No alias ATPase family AAA domain-containing protein FIGL1... 0.05 OrthoFinder output from all 47 species
Gb_15617 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Gb_15618 No alias ATPase family AAA domain-containing protein FIGL1... 0.04 OrthoFinder output from all 47 species
LOC_Os11g43970.1 LOC_Os11g43970 ATPase family AAA domain-containing protein FIGL1... 0.05 OrthoFinder output from all 47 species
Lfl_g04238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g17632 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10428622g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_48428g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6352g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_93384g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.04 OrthoFinder output from all 47 species
Msp_g24317 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002972 No alias not classified & original description: CDS=1-3879 0.06 OrthoFinder output from all 47 species
Solyc03g110900.4.1 Solyc03g110900 ATPase family AAA domain-containing protein FIGL1... 0.06 OrthoFinder output from all 47 species
Solyc09g074950.3.1 Solyc09g074950 ATPase family AAA domain-containing protein FIGL1... 0.07 OrthoFinder output from all 47 species
Spa_g01811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001631_P001 Zm00001e001631 ATPase family AAA domain-containing protein FIGL1... 0.05 OrthoFinder output from all 47 species
Zm00001e011359_P005 Zm00001e011359 ATPase family AAA domain-containing protein FIGL1... 0.11 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 587 622
IPR003959 ATPase_AAA_core 433 562
No external refs found!