Zm00001d050712 (GRMZM5G811633)


Aliases : GRMZM5G811633

Description : 27.3.64 RNA.regulation of transcription.PHOR1 plant U-box 25 (PUB25)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d050712
Cluster HCCA cluster: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AT3G18710 PUB29, ATPUB29 plant U-box 29 0.02 Gene family
AT3G52450 PUB22 plant U-box 22 0.02 Gene family
Cre03.g144344 No alias No description available 0.02 Gene family
LOC_Os01g64570 Os01g0865700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os02g33590 Os02g0539200 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os02g34410 Os02g0548700 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.06 Gene family
LOC_Os02g46500 Os02g0690600 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os04g34030 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os04g49970 Os04g0589700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
MA_10432179g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_10432981g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_311559g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_415393g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
MA_779502g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Smo231257 PACid_15415325 No description available 0.03 Gene family
Smo414754 PACid_15419715 No description available 0.02 Gene family
Solyc04g071030.1.1 Solyc04g071030.1 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.02 Gene family
Zm00001d001769 GRMZM2G013776 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.06 Gene family
Zm00001d002498 GRMZM2G092128 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d016730 GRMZM2G071484 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Zm00001d025379 GRMZM2G059042 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.03 Gene family
Zm00001d026040 GRMZM2G169690 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Zm00001d042738 GRMZM2G135713 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 18 89
No external refs found!