Description : not classified & original description: none
Gene families : OG0005122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005122_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g21006 | |
Cluster | HCCA: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g01134 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021070.69 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
Cre01.g046652 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g23820.1 | LOC_Os04g23820 | Probable methionine--tRNA ligase OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g26186 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Mp1g24710.1 | No alias | Probable methionine--tRNA ligase OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g16959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g59684 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0124.g021577 | No alias | not classified & original description: CDS=1-888 | 0.03 | OrthoFinder output from all 47 species | |
Spa_g00639 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002547 | tRNA-bd_dom | 79 | 174 |
No external refs found! |