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  5. Dcu_g20398

Dcu_g20398 (TEL1)


Aliases : TEL1

Description : not classified & original description: none


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g20398

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.03 OrthoFinder output from all 47 species
Aspi01Gene40898.t1 TEL1, Aspi01Gene40898 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G063900.1 TEL1, Ceric.21G063900 not classified & original description: pacid=50602943... 0.03 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.08 OrthoFinder output from all 47 species
Dac_g14075 TEL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003988001 TEL1 Protein terminal ear1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
GSVIVT01024201001 MCT2 Protein terminal ear1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Mp1g04100.1 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.04 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 796 904
IPR000504 RRM_dom 494 559
No external refs found!