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  5. Dcu_g20263

Dcu_g20263 (UPL3, KAK)


Aliases : UPL3, KAK

Description : E3 ubiquitin ligase *(UPL3) & original description: none


Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g20263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00119160 UPL3, KAK,... Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.13 OrthoFinder output from all 47 species
Adi_g077989 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08003 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g49450 UPL3, KAK LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g02725 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g14715 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g19314 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47900 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20762 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g14867 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061600.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.02G085400.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.05 OrthoFinder output from all 47 species
Cre07.g312900 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dde_g21337 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08697 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09278 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018731001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01024033001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_07121 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Gb_07122 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Gb_20276 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Gb_20277 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Len_g18323 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19132 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g02474 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426439g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.08 OrthoFinder output from all 47 species
MA_10434379g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.09 OrthoFinder output from all 47 species
MA_140610g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
MA_62286g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
MA_884104g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Mp1g24750.1 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Msp_g00722 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13943 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25162 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25807 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g17671 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01429 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29297 No alias E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Smo146155 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc01g111530.3.1 UPL3, KAK, Solyc01g111530 monomeric E3 ubiquitin ligase (HECT) 0.08 OrthoFinder output from all 47 species
Solyc10g055450.2.1 UPL3, KAK, Solyc10g055450 monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species
Spa_g06979 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02200 UPL3, KAK E3 ubiquiTin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008508_P001 UPL3, KAK, Zm00001e008508 monomeric E3 ubiquitin ligase (HECT) 0.08 OrthoFinder output from all 47 species
Zm00001e013385_P003 UPL3, KAK, Zm00001e013385 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 1533 1934
No external refs found!